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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST003635
species:
Zea mays
miRNA family:
MIR159
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGAGTGAAGGGAGCTCTG
miRNA*
GTGCTCCCTTCACACCAATAA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGGTCTTAAGGCG
GTGCTCCCTTCACACCAATAA
ACGGTCGATCTGATGGGTGGTACAGCTGCTCGTTCATGGTTCCCACTGTCCCATCTCATCAGAGAG
AGAGAAGATCGTGAGAGAGCGAGAGATGCTTGAGATGGGCTTGTGGTTTGCATGACCGAGGAGCTGCCTCGTCCCCTTCGTTGACCGCTG
TTTGGAGTGA
AGGGAGCTCTG
CATCTTGCTC
dot-bracket secondary structure
..........(((
(.(((((((((((.((((...
.(((((((..(((.((((((..(((((.((((.(((((....((((.(.((((((((.(((..((.
........)).)))..(((((.....))))))))))))))..))))....))))).)))).)))))..))).)))..))))))))))...
.)))).))))
))))))).)))
).........
SIMILARITIES
miRBase
zma-MIR159i
:
5e-48
PMRD
zma-miR159b
:
1e-45
microPC
miR319
:
0.00000000001
UniProt
no hits
RFAM
MIR159: 2e-47
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record